BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038C12SP1|AL430524
(813 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1684 1569 0.0
>3x_Contig1684
Length = 14609
Score = 1569 bits (787), Expect = 0.0
Identities = 803/813 (98%)
Strand = Plus / Plus
Query: 1 tttgcatttcattctactttaaacgtcccattccatttctwtttaagctgtcatgtctac 60
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 4205 tttgcatttcattctacttgaaacgtcccattccatttctatttaagctgtcatgtctac 4264
Query: 61 agagacagaaactaaaamcaatgtggtcaatattgatgagttacaaaacttcggaattaa 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4265 agagacagaaactaaaaccaatgtggtcaatattgatgagttacaaaacttcggaattaa 4324
Query: 121 cgcgtctgatatwactaaattgaagactgctggtatatttaccgttaacacttgtttgtc 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4325 cgcgtctgatataactaaattgaagactgctggtatatttaccgttaacacttgtttgtc 4384
Query: 181 gacgaccagaaggaatttgtgtaaagttagagggttatcggaagtgaaggtagaaaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4385 gacgaccagaaggaatttgtgtaaagttagagggttatcggaagtgaaggtagaaaagat 4444
Query: 241 taaagaagctgccaataaaatcatcaccattggcttwattccagcaactctgcaatggca 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4445 taaagaagctgccaataaaatcatcaccattggctttattccagcaactctgcaatggca 4504
Query: 301 gattcgtcaagcagttatgtctatctctaccgggtcgaaacaattcgattctgtactagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4505 gattcgtcaagcagttatgtctatctctaccgggtcgaaacaattcgattctgtactagg 4564
Query: 361 aggaggaataatgacaatgtccataactgaggtgtttggggagtttaggtgcggtaagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4565 aggaggaataatgacaatgtccataactgaggtgtttggggagtttaggtgcggtaagac 4624
Query: 421 tcaattatcccatacgttatgcgtgacagctcaattaccaaaagaactaaatggacctra 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4625 tcaattatcccatacgttatgcgtgacagctcaattaccaaaagaactaaatggacctga 4684
Query: 481 gggtaaggttgcatatattgatacagagggtactttcagaccagaaagaatcaagcagat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4685 gggtaaggttgcatatattgatacagagggtactttcagaccagaaagaatcaagcagat 4744
Query: 541 agcacaagggtatgatttggatcccgaagtgtgccttgaaaatatctcgtacgccagggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4745 agcacaagggtatgatttggatcccgaagtgtgccttgaaaatatctcgtacgccagggc 4804
Query: 601 actcaatagtgagcatcagatggagttacttgaacagcttggcgaggaactctcttcagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4805 actcaatagtgagcatcagatggagttacttgaacagcttggcgaggaactctcttcagg 4864
Query: 661 agaatatagactattaatagtagactcaattatggccaatttcagagttgawtattcagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4865 agaatatagactattaatagtagactcaattatggccaatttcagagttgattattcagg 4924
Query: 721 ccgtggggaattgaacgagcgtcacaaaaaactaaaccaacatctttctagattgaatcg 780
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 4925 ccgtggggaattgaacgagcgtcagcaaaaactaaaccaacatctttctagattgaatcg 4984
Query: 781 tatcgctgaggagaacaatatcgcagtttwcat 813
||||||||||||||||||||||||||||| |||
Sbjct: 4985 tatcgctgaggagaacaatatcgcagttttcat 5017
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4970
Number of Sequences: 1807
Number of extensions: 4970
Number of successful extensions: 16
Number of sequences better than 1.0e-20: 1
length of query: 813
length of database: 10,358,551
effective HSP length: 16
effective length of query: 797
effective length of database: 10,329,639
effective search space: 8232722283
effective search space used: 8232722283
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)